Reaction: Oxidative demethylation of 3-meC damaged DNA By ALKBH3

- in pathway: ALKBH3 mediated reversal of alkylation damage
ALKBH3, a homolog of E.coli AlkB (Trewick et al. 2002), removes the methyl group from 3-methylcytosine (3-meC) in a reaction dependent on alpha-ketoglutarate, oxygen and Fe2+. ALKBH3 directly reverses the alkylating damage of DNA in the form of 3-meC, releasing formaldehyde (Duncan et al. 2002). The reversal of alkylating damage of dsDNA by ALKBH3 requires the presence of DNA helicase ASCC3, a component of the activating signal co-integrator complex (Dango et al. 2011). ALKBH3 can also repair methylated RNA (Aas et al. 2003).
Reaction - small molecule participants:
CH2O [nucleoplasm]
CO2 [nucleoplasm]
SUCCA [nucleoplasm]
2OG [nucleoplasm]
O2 [nucleoplasm]
Reactome.org reaction link: R-HSA-112124

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Reaction input - small molecules:
2-oxoglutarate(2-)
ChEBI:16810
dioxygen
ChEBI:15379
Reaction output - small molecules:
formaldehyde
ChEBI:16842
carbon dioxide
ChEBI:16526
succinate(2-)
ChEBI:30031
Reactome.org link: R-HSA-112124